The detailed information of tRNA gene sequence


Sequence ID>W133003147
Genome IDAQYT01000027
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA011-A08 OD1 bacterium SCGC AAA011-A08 [AQYT]
Start position on genome 1680
End posion on genome 1605
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttattgctt
tRNA gene sequence 
GCCGCAATAGCTCAGGCAGTAGAGCATTGTCTTGGTAAGACAAAGGTCAACAGTGCAAAT
CTGTTTTGCGGCTCCA
Downstream region at tRNA end position 
tggaaacaaa
Secondary structure (Cloverleaf model)
>W133003147	Thr	GGT
                   t      TCCA tggaaacaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     T T G T C     A
      G G A        A      | | | | |     A
    C       C T C G       A A C A G     C
    A       | | | |                 T G
    G       G A G C
      T A          A     AGGTC
                    T - A
                    T - A
                    G - C
                    T - A
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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