The detailed information of tRNA gene sequence


Sequence ID>W1710660186
Genome IDJXMS01000009
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio spirochaetisodalis [JXMS]
Start position on genome 13707
End posion on genome 13613
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcgcaacgc
tRNA gene sequence 
GGAGAGGTGTCCGAGCCCGGCCGAAGGAGCACGATTGGAAATCGTGTGTACTAGCAAAAC
TGGTACCGAGAGTTCGAATCTCTCCCTCTCCGCCA
Downstream region at tRNA end position 
catgcaaaca
Secondary structure (Cloverleaf model)
>W1710660186	Ser	GGA
                   c      GCCA catgcaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    C C G A        G      | | | | |     G
  C         G C C T       G A G A G     C
  G           | | |                 T T
  G         A G G A
    C C G A        G     TGTACTAGCAAAACTGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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