The detailed information of tRNA gene sequence


Sequence ID>W1710660213
Genome IDJXMS01000022
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio spirochaetisodalis [JXMS]
Start position on genome 30253
End posion on genome 30329
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataaaaacgc
tRNA gene sequence 
AGGGGTGTAGCTCCAACGGCTAGAGCGCCGGTCTCCAAAACCGGATGTTGCGGGTTCGAA
TCCCTCCACCCCTGCCA
Downstream region at tRNA end position 
ttttcttcct
Secondary structure (Cloverleaf model)
>W1710660213	Trp	CCA
                   c      GCCA ttttcttcct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      A A C        A      |   | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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