The detailed information of tRNA gene sequence


Sequence ID>W133004420
Genome IDATVA01000016
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPaucidesulfovibrio longus DSM 6739 [ATVA]
Start position on genome 330522
End posion on genome 330617
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccctcatgc
tRNA gene sequence 
GGAGAGGTAGCGAAGTCCGGCCGTAACGCGCTCGACTCGAAATCGAGTTACGGGTTAATA
GCCCGTACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agaacttgaa
Secondary structure (Cloverleaf model)
>W133004420	Ser	CGA
                   c      GCCA agaacttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  C         A G C G       G T G G G     C
  G         |     |                 T T
  G         T A A C
    C C G          G     AGTTACGGGTTAATAGCCCGTAC
                    C - G
                    G - C
                    C   T
                    T - A
                    C   A
                  G       A
                  A       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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