The detailed information of tRNA gene sequence


Sequence ID>W1710701337
Genome IDLBFC01000015
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho affectus [LBFC]
Start position on genome 10438
End posion on genome 10349
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgatagtat
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTTGCCTGCTAAGCAAGTGTGGGATTTTTCCCA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ggtttttggg
Secondary structure (Cloverleaf model)
>W1710701337	Ser	GCT
                   t      GCCA ggtttttggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGGGATTTTTCCCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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