The detailed information of tRNA gene sequence


Sequence ID>W1710701346
Genome IDLBFC01000021
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho affectus [LBFC]
Start position on genome 12910
End posion on genome 12999
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attgatgatt
tRNA gene sequence 
GGAGGCGTGCACCGAATTGGCTAAGGGGCCGGTCTCGAAAACCGGTGGGCGTTTTTGCCC
TTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
aatggcaggg
Secondary structure (Cloverleaf model)
>W1710701346	Ser	CGA
                   t      GCCA aatggcaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
    T A A G        G      | | | | |     G
  T         C C A C       G T G G G     C
  G           |   |                 T T
  G         A G G G
    C T A          G     TGGGCGTTTTTGCCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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