The detailed information of tRNA gene sequence


Sequence ID>W132000034
Genome IDAMWG01000094
Search identical group
Phylum/ClassPlanctomycetota
SpeciesRhodopirellula baltica SWK14 [AMWG]
Start position on genome 2468
End posion on genome 2558
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actcattaac
tRNA gene sequence 
GGAAGGGCAATCCGATGGGCGACGGTATCCGGTTGCTAGCCGGACGAGCATCTTGATGGT
GCCTTGAGGGTTCGACTCCCTCTCCTTCCGCtt
Downstream region at tRNA end position 
aattgaaaga
Secondary structure (Cloverleaf model)
>W132000034	Ser	GCT
                   c      GCtt aattgaaaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T C
                    C     C T C C C     A
      T A G        A      | | | | |     G
    G       C C T A       G A G G G     C
    G         | + |                 T T
    G       C G G T
      C G A        A     CGAGCATCTTGATGGTGCCTT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       G
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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