The detailed information of tRNA gene sequence


Sequence ID>W132000184
Genome IDARJV01000027
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesDuganella zoogloeoides ATCC 25935 [ARJV]
Start position on genome 849434
End posion on genome 849524
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
gcactcccaa
tRNA gene sequence 
gGAAGGCAATCTCATCCGGTGATGGGGCCGGGCTTCAAACCCGGTGAGGGGCGTCAGCCG
TTCCTCTGTAGGTTCGACTCCTACTGCTTTCCgcca
Downstream region at tRNA end position 
tttccccgtc
Secondary structure (Cloverleaf model)
>W132000184	seC	TCA
                   a      gcca tttccccgtc
                     g - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T          T C
                    A     C A T C C     A
      C C T        T      | | | | |     G
    G       A C T C       G T A G G     C
    G       | | + |                 T T
    T       T G G G
      G A          G     TGAGGGGCGTCAGCCGTTCCTCT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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