The detailed information of tRNA gene sequence


Sequence ID>W132000209
Genome IDARWE01000001
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeopsychrobacter electrodiphilus DSM 16401 [ARWE]
Start position on genome 2640671
End posion on genome 2640766
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
aaaattgtat
tRNA gene sequence 
GGAGGCAGCCAGTGCTCTGGTGACACTCACGGTCTTCAAAACCGATGTGGGGCGCATCCC
GTCCCAGGTGAGTTCGATTCTCATCTGCCTCCGCCA
Downstream region at tRNA end position 
tttttcgata
Secondary structure (Cloverleaf model)
>W132000209	seC	TCA
                   t      GCCA tttttcgata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T T
                    C     T A C T C     A
      C T C        C      + | | | |     G
    T       G T G A       G T G A G     C
    G       | | | |                 T T
    G       C A C T
      T G A        C     TGTGGGGCGCATCCCGTCCCAG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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