The detailed information of tRNA gene sequence


Sequence ID>W1710718660
Genome IDLFER01000009
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAlphaproteobacteria bacterium casp-alpha6 [LFER]
Start position on genome 83888
End posion on genome 83971
Amino Acid Pseudo
Anticodon GTA
Upstream region at tRNA start position 
aaagagccgt
tRNA gene sequence 
GGGCGACAGGCCGCAAGGTGTGGCAGGGGACTGTAACTCCCTCGCGGAGACGCACGCTTG
GTTCGATTCCAAGGTCGCCCACCA
Downstream region at tRNA end position 
cttcaacctt
Secondary structure (Cloverleaf model)
>W1710718660	Pseudo	GTA
                   t      ACCA cttcaacctt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          T T
                    A     G A A C C     A
        A C        G      | | | | |     G
      A     G C C G       C T T G G     C
      G     + | | |                 T T
      G     T G G C
        T G        A     CGCGGAGACGCACG
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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