The detailed information of tRNA gene sequence


Sequence ID>W1710718991
Genome IDLFFI01000020
Search identical group
Phylum/ClassActinomycetota
SpeciesActinobacteria bacterium casp-actino9 [LFFI]
Start position on genome 30507
End posion on genome 30412
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctgcgcgac
tRNA gene sequence 
GGAGGTGTCCGAGCGCCTGGTGGGCTCCGCCGTCTTCAACACGGTCGGGACGGACGACCT
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
acacgttcac
Secondary structure (Cloverleaf model)
>W1710718991	SeC	TCA
                   c      GCCA acacgttcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C G        C      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     CGGGACGGACGACCTCCGTCCG
                    G + T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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