The detailed information of tRNA gene sequence


Sequence ID>W1710719038
Genome IDLFFI01000103
Search identical group
Phylum/ClassActinomycetota
SpeciesActinobacteria bacterium casp-actino9 [LFFI]
Start position on genome 34016
End posion on genome 33921
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtgcatact
tRNA gene sequence 
GGAGGTGTCAGAGCGCCTGGTGGGCTCCGCCGTCTTCAACACGGTTGGGACGGATGACCT
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
tgaccgtcgt
Secondary structure (Cloverleaf model)
>W1710719038	SeC	TCA
                   t      GCCA tgaccgtcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C G        A      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGGGACGGATGACCTCCGTCCG
                    G + T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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