The detailed information of tRNA gene sequence


Sequence ID>W1710719041
Genome IDLFFI01000107
Search identical group
Phylum/ClassActinomycetota
SpeciesActinobacteria bacterium casp-actino9 [LFFI]
Start position on genome 44856
End posion on genome 44945
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcccgtgct
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGCCGAATGGGACGCCCTGCTAAGGCGTTGACTGCGCAAGCGGT
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctcgccgtcg
Secondary structure (Cloverleaf model)
>W1710719041	Ser	GCT
                   t      GCCA ctcgccgtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       G T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGACTGCGCAAGCGGTCC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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