The detailed information of tRNA gene sequence


Sequence ID>W1710719134
Genome IDLFFL01000080
Search identical group
Phylum/ClassActinomycetota
SpeciesActinobacteria bacterium casp-actino12 [LFFL]
Start position on genome 5493
End posion on genome 5399
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctcttacatt
tRNA gene sequence 
GGAGGTGAATGAGCGCCTGGTGGGCTCCACAGTCTTCAAAACTGTAGAAAGGTGTAATAA
TCTTTGGCAGGTTCGATTCCTGTCCACCTCCGCTA
Downstream region at tRNA end position 
ctatatactt
Secondary structure (Cloverleaf model)
>W1710719134	SeC	TCA
                   t      GCTA ctatatactt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    A     T G T C C     A
      C C G        T      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     AGAAAGGTGTAATAATCTTTG
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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