The detailed information of tRNA gene sequence


Sequence ID>W1710720698
Genome IDLFLA01000019
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospina sp. LS_NOB [LFLA]
Start position on genome 10159
End posion on genome 10234
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgatcgtgc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTAGAGCCCCCGGCTCATAACCGGTAGGTCGGAGGTTCGAAT
CCTCCTGGGCCCACCA
Downstream region at tRNA end position 
ataaatacaa
Secondary structure (Cloverleaf model)
>W1710720698	Met	CAT
                   c      ACCA ataaatacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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