The detailed information of tRNA gene sequence


Sequence ID>W1710720700
Genome IDLFLA01000020
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospina sp. LS_NOB [LFLA]
Start position on genome 26937
End posion on genome 27013
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatatgcat
tRNA gene sequence 
GGCGGTGTAGCTCAGGTGGTTAGAGCATACGGCTCATATCCGTAGTGTCGGGGGTTCAAC
TCCCTCCACCGCTACCA
Downstream region at tRNA end position 
ttttaatata
Secondary structure (Cloverleaf model)
>W1710720700	Met	CAT
                   t      ACCA ttttaatata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     C T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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