The detailed information of tRNA gene sequence


Sequence ID>W1710733558
Genome IDLGCM01000047
Search identical group
Phylum/ClassChloroflexota
SpeciesLevilinea saccharolytica [LGCM]
Start position on genome 24256
End posion on genome 24351
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttatcggt
tRNA gene sequence 
GGGAGTGGATGGATCCCGGTGGGTTCCCCGGTCTTCAAAACCGGTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
gctgtttatt
Secondary structure (Cloverleaf model)
>W1710733558	SeC(p)	TCA
                   t      GCCt gctgtttatt
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T A G G       G T G G G     C
    G       + | + |                 T T
    T       G T T C
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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