The detailed information of tRNA gene sequence


Sequence ID>W1710743152
Genome IDLGUD01000010
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesRhodocyclaceae bacterium Paddy-1 [LGUD]
Start position on genome 197991
End posion on genome 198064
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atttggtttt
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTATGCACCGGATTGCAAATCCGTGTAGGTCGGTTCGACTCC
GGCTCGCGCCTCCA
Downstream region at tRNA end position 
gtagcttgaa
Secondary structure (Cloverleaf model)
>W1710743152	Cys	GCA
                   t      TCCA gtagcttgaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     C G G C C     A
        G A        A      | + | | |     G
      C     A A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAG
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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