The detailed information of tRNA gene sequence


Sequence ID>W1710743179
Genome IDLGUD01000042
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesRhodocyclaceae bacterium Paddy-1 [LGUD]
Start position on genome 252525
End posion on genome 252450
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cnnnnnnnnn
tRNA gene sequence 
NTCCCCATCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGATAACCGGGGTTCGAAT
CCCCGTGGGGACGCCA
Downstream region at tRNA end position 
cctacactgg
Secondary structure (Cloverleaf model)
>W1710743179	Glu	TTC
                   n      GCCA cctacactgg
                     N   C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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