The detailed information of tRNA gene sequence


Sequence ID>W1710756485
Genome IDLIAM01000058
Search identical group
Phylum/ClassActinomycetota
SpeciesActinobacteria bacterium BACL15 MAG-120619-bin91 [LIAM]
Start position on genome 5810
End posion on genome 5735
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccttgcgcct
tRNA gene sequence 
CGGGGCGTAGCGTAGTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGATCGGGAGTTCGAAT
CTCCCCGCCCCGACCA
Downstream region at tRNA end position 
gtttgtctcg
Secondary structure (Cloverleaf model)
>W1710756485	Pro	TGG
                   t      ACCA gtttgtctcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       T G C G       G G G A G     C
    G       + | | |                 T T
    C       G C G C
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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