The detailed information of tRNA gene sequence


Sequence ID>W1710757917
Genome IDLICT01000024
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagibacteraceae bacterium BACL20 MAG-120920-bin64 [LICT]
Start position on genome 2493
End posion on genome 2568
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaactctat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGAGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
ataagctaaa
Secondary structure (Cloverleaf model)
>W1710757917	Trp	CCA
                   t      GCCA ataagctaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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