The detailed information of tRNA gene sequence


Sequence ID>W1710757929
Genome IDLICT01000221
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagibacteraceae bacterium BACL20 MAG-120920-bin64 [LICT]
Start position on genome 1535
End posion on genome 1624
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atcaataaat
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTTAAAGCGCACGCTTGGAAAGTGTGTGTACTGTTAAAGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gaattgaaaa
Secondary structure (Cloverleaf model)
>W1710757929	Ser	GGA
                   t      GCCA gaattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGTACTGTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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