The detailed information of tRNA gene sequence


Sequence ID>W1710770205
Genome IDLITL01000013
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas porphyrae [LITL]
Start position on genome 27267
End posion on genome 27359
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccacaagac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tttattttat
Secondary structure (Cloverleaf model)
>W1710770205	Ser	GCT
                   c      GCCA tttattttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATAGGGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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