The detailed information of tRNA gene sequence


Sequence ID>W1710770267
Genome IDLITL01000034
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas porphyrae [LITL]
Start position on genome 1343
End posion on genome 1259
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gaattatcgt
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTTCGCT
GGTTCGAATCCAGCTCCCTCCACCA
Downstream region at tRNA end position 
ctttattctt
Secondary structure (Cloverleaf model)
>W1710770267	Tyr	GTA
                   t      ACCA ctttattctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCAGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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