The detailed information of tRNA gene sequence


Sequence ID>C021147
Genome IDCP000100
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus elongatus PCC 7942 = FACHB-805 [CP000100]
Start position on genome 2622812
End posion on genome 2622884
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctctgctctt
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCAAGT
CCTCCAGGGCGCGttt
Downstream region at tRNA end position 
taaacaacct
Secondary structure (Cloverleaf model)
>C021147	Trp	CCA
                   t      Gttt taaacaacct
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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