The detailed information of tRNA gene sequence


Sequence ID>C09300059
Genome IDCP001277
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCandidatus Hamiltonella defensa 5AT [Acyrthosiphon pisum] T5A [CP001277]
Start position on genome 1509291
End posion on genome 1509365
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taatgatatt
tRNA gene sequence 
GGGCTGTTAGCTTAACGATAGAGCTGAGGGCTTTTAGCCCATCGCTTGCGGGTTTGAGTC
CTGCACAGCCCGCCA
Downstream region at tRNA end position 
actccccgat
Secondary structure (Cloverleaf model)
>C09300059	Lys	TTT
                   t      GCCA actccccgat
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A          T G
                    T     C G T C C     A
        A A        A      | | + | |     G
      C     T T C G       G C G G G     T
      G     + | | |                 T T
      A     G A G C
        T A        T     CGCTT
                    G + T
                    A   A
                    G - C
                    G - C
                    G - C
                  C       G
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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