The detailed information of tRNA gene sequence


Sequence ID>C131015925
Genome IDCP005928
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium avium subsp. paratuberculosis MAP4 [CP005928]
Start position on genome 4581673
End posion on genome 4581746
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaaccgcga
tRNA gene sequence 
AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCtg
Downstream region at tRNA end position 
aacagggatc
Secondary structure (Cloverleaf model)
>C131015925	Trp	CCA
                   a      GCtg aacagggatc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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