The detailed information of tRNA gene sequence


Sequence ID>C171019200
Genome IDCP012998
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae 2012Env-9 [CP012997, CP012998]
Start position on genome 2858299
End posion on genome 2858374
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtatcttagt
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACT
CCCCTACGGGATACCA
Downstream region at tRNA end position 
cttcccttga
Secondary structure (Cloverleaf model)
>C171019200	Glu	TTC
                   t      ACCA cttcccttga
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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