Composite table

Fungi


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 20.36 Ser AGA 85 TCT 8.22 Tyr ATA 0 TAT 16.80 Cys ACA 0 TGT 3.92 T
GAA 69 TTC 19.02 GGA 0 TCC 8.87 GTA 58 TAC 13.01 GCA 35 TGC 5.48 C
Leu TAA 32 TTA 17.06 TGA 20 TCA 8.10 ochre TTA 0 TAA 1.59 opal Sec TCA 0 TGA 1.20 A
CAA 55 TTG 14.24 CGA 19 TCG 10.70 amber CTA 0 TAG 0.52 Trp CCA 49 TGG 12.95 G
C Leu AAG 39 CTT 11.76 Pro AGG 40 CCT 7.44 His ATG 0 CAT 11.43 Arg ACG 37 CGT 13.29 T
GAG 4 CTC 14.68 GGG 0 CCC 8.50 GTG 53 CAC 10.19 GCG 0 CGC 22.13 C
TAG 17 CTA 5.59 TGG 52 CCA 8.36 Gln TTG 49 CAA 16.78 TCG 52 CGA 4.19 A
CAG 21 CTG 39.43 CGG 5 CCG 19.65 CTG 42 CAG 22.95 CCG 10 CGG 8.89 G
A Ile AAT 99 ATT 26.36 Thr AGT 83 ACT 9.04 Asn ATT 0 AAT 19.42 Ser ACT 0 AGT 8.46 T
GAT 0 ATC 26.93 GGT 0 ACC 20.88 GTT 76 AAC 18.48 GCT 27 AGC 14.16 C
TAT 13 ATA 7.41 TGT 23 ACA 10.48 Lys TTT 37 AAA 30.42 Arg TCT 57 AGA 4.54 A
Met CAT 79 ATG 24.53 CGT 12 ACG 14.01 CTT 134 AAG 17.51 CCT 12 AGG 2.36 G
G Val AAC 97 GTT 15.87 Ala AGC 95 GCT 15.44 Asp ATC 0 GAT 29.15 Gly ACC 0 GGT 19.36 T
GAC 0 GTC 19.47 GGC 0 GCC 32.29 GTC 103 GAC 25.04 GCC 115 GGC 32.60 C
TAC 15 GTA 11.50 TGC 33 GCA 17.59 Glu TTC 65 GAA 36.11 TCC 36 GGA 11.41 A
CAC 24 GTG 25.07 CGC 9 GCG 31.99 CTC 89 GAG 23.65 CCC 12 GGG 11.18 G



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