Composite table

Balneolota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 31.83 Ser AGA 0 TCT 10.85 Tyr ATA 0 TAT 20.64 Cys ACA 0 TGT 3.13 T
GAA 1 TTC 15.58 GGA 1 TCC 11.83 GTA 1 TAC 14.65 GCA 1 TGC 3.08 C
Leu TAA 1 TTA 12.22 TGA 1 TCA 12.72 ochre TTA 0 TAA 1.47 opal Sec TCA 0 TGA 0.84 A
CAA 1 TTG 12.23 CGA 0 TCG 9.01 amber CTA 0 TAG 0.54 Trp CCA 1 TGG 12.43 G
C Leu AAG 0 CTT 20.70 Pro AGG 0 CCT 8.67 His ATG 0 CAT 11.12 Arg ACG 1 CGT 8.76 T
GAG 1 CTC 14.06 GGG 1 CCC 11.35 GTG 1 CAC 8.79 GCG 0 CGC 11.01 C
TAG 1 CTA 5.02 TGG 1 CCA 6.22 Gln TTG 1 CAA 13.90 TCG 0 CGA 6.63 A
CAG 1 CTG 29.43 CGG 1 CCG 14.30 CTG 0 CAG 23.05 CCG 1 CGG 10.48 G
A Ile AAT 0 ATT 32.62 Thr AGT 0 ACT 9.71 Asn ATT 0 AAT 27.84 Ser ACT 0 AGT 10.67 T
GAT 3 ATC 23.66 GGT 1 ACC 20.11 GTT 1 AAC 19.58 GCT 1 AGC 12.82 C
TAT 0 ATA 12.36 TGT 1 ACA 13.63 Lys TTT 1 AAA 35.44 Arg TCT 1 AGA 8.44 A
Met CAT 3 ATG 23.72 CGT 1 ACG 11.59 CTT 0 AAG 16.52 CCT 1 AGG 4.91 G
G Val AAC 0 GTT 20.74 Ala AGC 0 GCT 17.04 Asp ATC 0 GAT 41.45 Gly ACC 0 GGT 18.66 T
GAC 1 GTC 8.72 GGC 1 GCC 21.91 GTC 1 GAC 19.21 GCC 1 GGC 18.92 C
TAC 1 GTA 17.22 TGC 3 GCA 18.59 Glu TTC 2 GAA 47.66 TCC 1 GGA 22.20 A
CAC 0 GTG 16.96 CGC 0 GCG 12.37 CTC 0 GAG 26.53 CCC 0 GGG 11.66 G



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