Composite table

Balneolota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 31.31 Ser AGA 0 TCT 11.09 Tyr ATA 0 TAT 21.99 Cys ACA 0 TGT 3.25 T
GAA 20 TTC 14.86 GGA 20 TCC 12.19 GTA 20 TAC 14.32 GCA 20 TGC 3.01 C
Leu TAA 20 TTA 12.66 TGA 20 TCA 11.63 ochre TTA 0 TAA 1.51 opal Sec TCA 0 TGA 0.75 A
CAA 20 TTG 13.61 CGA 6 TCG 8.90 amber CTA 0 TAG 0.60 Trp CCA 19 TGG 12.77 G
C Leu AAG 0 CTT 19.47 Pro AGG 0 CCT 8.93 His ATG 0 CAT 11.78 Arg ACG 20 CGT 9.09 T
GAG 20 CTC 12.57 GGG 20 CCC 11.94 GTG 16 CAC 8.60 GCG 0 CGC 10.43 C
TAG 20 CTA 5.70 TGG 22 CCA 6.65 Gln TTG 20 CAA 15.56 TCG 19 CGA 7.22 A
CAG 17 CTG 28.93 CGG 6 CCG 13.02 CTG 0 CAG 22.84 CCG 1 CGG 10.55 G
A Ile AAT 0 ATT 32.23 Thr AGT 0 ACT 9.97 Asn ATT 0 AAT 28.10 Ser ACT 0 AGT 11.16 T
GAT 27 ATC 23.13 GGT 20 ACC 21.31 GTT 20 AAC 19.16 GCT 20 AGC 12.02 C
TAT 0 ATA 12.97 TGT 20 ACA 12.30 Lys TTT 20 AAA 34.93 Arg TCT 18 AGA 6.89 A
Met CAT 66 ATG 23.71 CGT 17 ACG 10.99 CTT 0 AAG 18.47 CCT 11 AGG 4.67 G
G Val AAC 0 GTT 19.54 Ala AGC 0 GCT 17.49 Asp ATC 0 GAT 41.37 Gly ACC 0 GGT 18.47 T
GAC 20 GTC 9.64 GGC 20 GCC 23.90 GTC 21 GAC 19.43 GCC 20 GGC 18.37 C
TAC 20 GTA 17.70 TGC 26 GCA 16.96 Glu TTC 32 GAA 47.35 TCC 20 GGA 22.26 A
CAC 0 GTG 16.93 CGC 0 GCG 10.88 CTC 0 GAG 27.46 CCC 0 GGG 12.47 G



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