Composite table

Chlamydiota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 32.21 Ser AGA 0 TCT 29.13 Tyr ATA 0 TAT 22.02 Cys ACA 2 TGT 9.43 T
GAA 289 TTC 15.55 GGA 273 TCC 11.12 GTA 285 TAC 10.19 GCA 288 TGC 5.66 C
Leu TAA 349 TTA 33.27 TGA 296 TCA 10.93 ochre TTA 0 TAA 1.73 opal Sec TCA 11 TGA 0.59 A
CAA 285 TTG 17.94 CGA 255 TCG 6.55 amber CTA 0 TAG 0.83 Trp CCA 282 TGG 9.94 G
C Leu AAG 8 CTT 23.59 Pro AGG 0 CCT 21.41 His ATG 0 CAT 16.33 Arg ACG 282 CGT 12.71 T
GAG 273 CTC 12.53 GGG 261 CCC 7.40 GTG 285 CAC 7.25 GCG 1 CGC 7.82 C
TAG 287 CTA 13.50 TGG 292 CCA 9.31 Gln TTG 334 CAA 27.07 TCG 255 CGA 7.21 A
CAG 256 CTG 9.60 CGG 15 CCG 4.64 CTG 16 CAG 13.50 CCG 17 CGG 3.72 G
A Ile AAT 1 ATT 36.05 Thr AGT 1 ACT 16.18 Asn ATT 0 AAT 26.44 Ser ACT 1 AGT 11.00 T
GAT 267 ATC 19.78 GGT 277 ACC 9.83 GTT 293 AAC 12.42 GCT 292 AGC 8.77 C
TAT 7 ATA 13.67 TGT 293 ACA 17.29 Lys TTT 292 AAA 43.25 Arg TCT 287 AGA 11.17 A
Met CAT 846 ATG 20.50 CGT 254 ACG 8.32 CTT 38 AAG 18.85 CCT 192 AGG 3.65 G
G Val AAC 0 GTT 22.79 Ala AGC 1 GCT 31.00 Asp ATC 0 GAT 34.85 Gly ACC 0 GGT 14.32 T
GAC 265 GTC 10.84 GGC 264 GCC 11.78 GTC 295 GAC 11.55 GCC 303 GGC 10.38 C
TAC 299 GTA 16.09 TGC 270 GCA 19.18 Glu TTC 297 GAA 43.83 TCC 284 GGA 24.55 A
CAC 7 GTG 12.56 CGC 12 GCG 9.67 CTC 17 GAG 21.96 CCC 21 GGG 12.81 G



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