Composite table

Chloroflexota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 17.72 Ser AGA 0 TCT 6.88 Tyr ATA 0 TAT 15.62 Cys ACA 0 TGT 4.09 T
GAA 229 TTC 19.07 GGA 214 TCC 9.62 GTA 224 TAC 13.67 GCA 232 TGC 5.89 C
Leu TAA 206 TTA 8.78 TGA 220 TCA 7.47 ochre TTA 0 TAA 1.22 opal Sec TCA 167 TGA 1.08 A
CAA 224 TTG 16.95 CGA 213 TCG 10.09 amber CTA 1 TAG 0.96 Trp CCA 243 TGG 14.43 G
C Leu AAG 0 CTT 14.25 Pro AGG 0 CCT 9.67 His ATG 0 CAT 10.73 Arg ACG 27 CGT 10.64 T
GAG 237 CTC 21.01 GGG 230 CCC 14.68 GTG 247 CAC 10.56 GCG 200 CGC 23.46 C
TAG 245 CTA 6.47 TGG 227 CCA 9.84 Gln TTG 236 CAA 14.06 TCG 227 CGA 5.77 A
CAG 244 CTG 38.91 CGG 224 CCG 16.71 CTG 225 CAG 25.48 CCG 222 CGG 12.05 G
A Ile AAT 1 ATT 21.53 Thr AGT 0 ACT 9.09 Asn ATT 0 AAT 15.65 Ser ACT 0 AGT 7.83 T
GAT 215 ATC 29.36 GGT 218 ACC 23.13 GTT 249 AAC 16.24 GCT 224 AGC 15.65 C
TAT 13 ATA 10.60 TGT 225 ACA 9.65 Lys TTT 230 AAA 19.01 Arg TCT 226 AGA 4.97 A
Met CAT 686 ATG 22.75 CGT 220 ACG 13.63 CTT 225 AAG 18.70 CCT 214 AGG 5.46 G
G Val AAC 0 GTT 15.29 Ala AGC 1 GCT 18.78 Asp ATC 0 GAT 28.76 Gly ACC 0 GGT 17.63 T
GAC 245 GTC 21.08 GGC 245 GCC 36.99 GTC 255 GAC 22.13 GCC 303 GGC 31.03 C
TAC 220 GTA 11.36 TGC 195 GCA 16.07 Glu TTC 227 GAA 30.58 TCC 214 GGA 12.93 A
CAC 239 GTG 24.68 CGC 214 GCG 25.08 CTC 235 GAG 31.42 CCC 208 GGG 15.14 G



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