Composite table

Chloroflexota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 16.88 Ser AGA 0 TCT 6.16 Tyr ATA 0 TAT 14.52 Cys ACA 0 TGT 3.57 T
GAA 152 TTC 19.97 GGA 153 TCC 9.98 GTA 165 TAC 14.12 GCA 157 TGC 5.98 C
Leu TAA 143 TTA 7.65 TGA 155 TCA 6.68 ochre TTA 0 TAA 1.16 opal Sec TCA 109 TGA 1.17 A
CAA 162 TTG 17.06 CGA 157 TCG 10.83 amber CTA 0 TAG 0.90 Trp CCA 177 TGG 14.46 G
C Leu AAG 0 CTT 13.54 Pro AGG 0 CCT 9.01 His ATG 0 CAT 10.19 Arg ACG 17 CGT 10.72 T
GAG 172 CTC 22.51 GGG 168 CCC 15.27 GTG 173 CAC 10.86 GCG 129 CGC 26.82 C
TAG 181 CTA 4.99 TGG 165 CCA 8.76 Gln TTG 171 CAA 13.10 TCG 161 CGA 5.31 A
CAG 163 CTG 42.30 CGG 166 CCG 19.18 CTG 156 CAG 25.86 CCG 159 CGG 13.45 G
A Ile AAT 0 ATT 19.91 Thr AGT 0 ACT 7.89 Asn ATT 0 AAT 14.39 Ser ACT 0 AGT 6.89 T
GAT 133 ATC 30.87 GGT 161 ACC 24.05 GTT 171 AAC 16.47 GCT 155 AGC 15.77 C
TAT 9 ATA 8.68 TGT 165 ACA 8.50 Lys TTT 155 AAA 18.06 Arg TCT 170 AGA 3.75 A
Met CAT 467 ATG 22.31 CGT 150 ACG 14.57 CTT 165 AAG 17.38 CCT 151 AGG 4.63 G
G Val AAC 0 GTT 13.91 Ala AGC 0 GCT 17.28 Asp ATC 0 GAT 27.35 Gly ACC 0 GGT 16.47 T
GAC 171 GTC 22.95 GGC 179 GCC 39.74 GTC 165 GAC 23.19 GCC 199 GGC 33.20 C
TAC 148 GTA 10.09 TGC 128 GCA 15.24 Glu TTC 162 GAA 30.05 TCC 148 GGA 11.79 A
CAC 170 GTG 26.22 CGC 158 GCG 28.78 CTC 157 GAG 30.82 CCC 146 GGG 15.87 G



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