Composite table

Chrysiogenota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 21.55 Ser AGA 0 TCT 5.35 Tyr ATA 0 TAT 12.66 Cys ACA 0 TGT 3.88 T
GAA 4 TTC 19.34 GGA 4 TCC 17.36 GTA 4 TAC 17.07 GCA 4 TGC 7.81 C
Leu TAA 4 TTA 2.35 TGA 4 TCA 5.79 ochre TTA 0 TAA 0.89 opal Sec TCA 0 TGA 1.55 A
CAA 4 TTG 8.15 CGA 1 TCG 5.89 amber CTA 0 TAG 0.55 Trp CCA 4 TGG 10.29 G
C Leu AAG 0 CTT 13.70 Pro AGG 0 CCT 7.02 His ATG 0 CAT 9.97 Arg ACG 4 CGT 11.27 T
GAG 4 CTC 19.05 GGG 4 CCC 20.91 GTG 4 CAC 16.33 GCG 0 CGC 30.33 C
TAG 4 CTA 1.71 TGG 4 CCA 6.27 Gln TTG 4 CAA 7.68 TCG 3 CGA 4.64 A
CAG 4 CTG 58.40 CGG 2 CCG 8.68 CTG 0 CAG 36.82 CCG 1 CGG 10.27 G
A Ile AAT 0 ATT 23.10 Thr AGT 0 ACT 7.35 Asn ATT 0 AAT 14.38 Ser ACT 0 AGT 9.73 T
GAT 0 ATC 31.80 GGT 3 ACC 29.43 GTT 4 AAC 18.61 GCT 4 AGC 19.12 C
TAT 0 ATA 8.79 TGT 4 ACA 6.03 Lys TTT 4 AAA 17.61 Arg TCT 4 AGA 2.65 A
Met CAT 11 ATG 26.83 CGT 0 ACG 8.77 CTT 0 AAG 21.75 CCT 3 AGG 3.71 G
G Val AAC 0 GTT 13.32 Ala AGC 0 GCT 15.05 Asp ATC 0 GAT 26.72 Gly ACC 0 GGT 15.94 T
GAC 3 GTC 18.73 GGC 4 GCC 45.50 GTC 4 GAC 25.60 GCC 5 GGC 31.62 C
TAC 4 GTA 8.54 TGC 0 GCA 11.97 Glu TTC 5 GAA 33.40 TCC 4 GGA 12.81 A
CAC 0 GTG 28.57 CGC 0 GCG 14.93 CTC 0 GAG 32.66 CCC 1 GGG 11.47 G



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