Composite table

Cyanobacteriota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 28.30 Ser AGA 1 TCT 14.07 Tyr ATA 0 TAT 19.02 Cys ACA 0 TGT 6.25 T
GAA 169 TTC 10.71 GGA 147 TCC 8.54 GTA 155 TAC 10.45 GCA 167 TGC 3.97 C
Leu TAA 131 TTA 32.92 TGA 157 TCA 9.14 ochre TTA 1 TAA 1.63 opal Sec TCA 0 TGA 0.87 A
CAA 161 TTG 20.95 CGA 144 TCG 6.15 amber CTA 1 TAG 0.89 Trp CCA 156 TGG 14.55 G
C Leu AAG 15 CTT 12.05 Pro AGG 0 CCT 13.56 His ATG 2 CAT 11.26 Arg ACG 159 CGT 11.07 T
GAG 141 CTC 13.58 GGG 143 CCC 14.02 GTG 156 CAC 7.39 GCG 2 CGC 14.55 C
TAG 168 CTA 12.50 TGG 167 CCA 12.35 Gln TTG 167 CAA 33.94 TCG 8 CGA 7.86 A
CAG 139 CTG 19.05 CGG 130 CCG 7.90 CTG 17 CAG 18.03 CCG 143 CGG 8.29 G
A Ile AAT 1 ATT 37.80 Thr AGT 0 ACT 17.34 Asn ATT 4 AAT 27.86 Ser ACT 0 AGT 14.66 T
GAT 297 ATC 19.19 GGT 148 ACC 16.32 GTT 172 AAC 14.55 GCT 160 AGC 10.89 C
TAT 2 ATA 9.65 TGT 167 ACA 13.92 Lys TTT 169 AAA 33.53 Arg TCT 160 AGA 8.04 A
Met CAT 419 ATG 18.27 CGT 144 ACG 7.57 CTT 59 AAG 13.58 CCT 107 AGG 3.44 G
G Val AAC 0 GTT 20.48 Ala AGC 0 GCT 25.46 Asp ATC 0 GAT 34.91 Gly ACC 0 GGT 22.81 T
GAC 144 GTC 12.72 GGC 145 GCC 22.21 GTC 167 GAC 14.61 GCC 155 GGC 16.39 C
TAC 155 GTA 14.30 TGC 304 GCA 20.47 Glu TTC 164 GAA 43.94 TCC 162 GGA 17.61 A
CAC 58 GTG 18.05 CGC 121 GCG 14.05 CTC 7 GAG 18.26 CCC 114 GGG 11.32 G



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