Composite table

Deferribacterota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 34.45 Ser AGA 0 TCT 13.20 Tyr ATA 0 TAT 27.70 Cys ACA 0 TGT 5.57 T
GAA 12 TTC 14.74 GGA 12 TCC 8.79 GTA 12 TAC 12.66 GCA 12 TGC 5.69 C
Leu TAA 12 TTA 19.30 TGA 12 TCA 14.84 ochre TTA 0 TAA 1.67 opal Sec TCA 6 TGA 0.84 A
CAA 11 TTG 9.57 CGA 2 TCG 4.25 amber CTA 0 TAG 0.61 Trp CCA 12 TGG 7.01 G
C Leu AAG 8 CTT 29.41 Pro AGG 0 CCT 12.04 His ATG 0 CAT 9.94 Arg ACG 11 CGT 5.45 T
GAG 4 CTC 10.24 GGG 9 CCC 6.65 GTG 11 CAC 6.61 GCG 0 CGC 4.49 C
TAG 12 CTA 4.75 TGG 11 CCA 7.27 Gln TTG 12 CAA 7.76 TCG 0 CGA 1.47 A
CAG 12 CTG 17.80 CGG 7 CCG 6.31 CTG 2 CAG 16.85 CCG 12 CGG 2.02 G
A Ile AAT 0 ATT 31.01 Thr AGT 0 ACT 14.08 Asn ATT 0 AAT 31.27 Ser ACT 0 AGT 10.65 T
GAT 18 ATC 16.25 GGT 12 ACC 9.84 GTT 11 AAC 19.82 GCT 12 AGC 12.02 C
TAT 0 ATA 36.03 TGT 12 ACA 21.43 Lys TTT 12 AAA 57.52 Arg TCT 12 AGA 17.73 A
Met CAT 36 ATG 26.27 CGT 2 ACG 5.20 CTT 3 AAG 22.69 CCT 12 AGG 8.67 G
G Val AAC 0 GTT 27.16 Ala AGC 0 GCT 21.27 Asp ATC 0 GAT 37.11 Gly ACC 0 GGT 20.94 T
GAC 11 GTC 8.41 GGC 8 GCC 12.60 GTC 12 GAC 20.05 GCC 23 GGC 18.15 C
TAC 12 GTA 17.04 TGC 16 GCA 26.21 Glu TTC 11 GAA 45.00 TCC 12 GGA 16.21 A
CAC 0 GTG 15.08 CGC 0 GCG 9.47 CTC 0 GAG 24.15 CCC 9 GGG 10.74 G



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