Composite table

Deinococcota


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 8.79 Ser AGA 0 TCT 1.94 Tyr ATA 0 TAT 3.85 Cys ACA 0 TGT 0.91 T
GAA 0 TTC 24.62 GGA 0 TCC 10.55 GTA 0 TAC 21.39 GCA 0 TGC 4.64 C
Leu TAA 0 TTA 1.51 TGA 0 TCA 1.55 ochre TTA 0 TAA 0.70 opal Sec TCA 0 TGA 1.94 A
CAA 0 TTG 9.16 CGA 0 TCG 8.12 amber CTA 0 TAG 0.75 Trp CCA 0 TGG 14.21 G
C Leu AAG 0 CTT 9.57 Pro AGG 0 CCT 5.32 His ATG 0 CAT 3.70 Arg ACG 0 CGT 5.59 T
GAG 0 CTC 32.59 GGG 0 CCC 31.31 GTG 0 CAC 17.48 GCG 0 CGC 36.54 C
TAG 0 CTA 2.86 TGG 0 CCA 3.45 Gln TTG 0 CAA 5.30 TCG 0 CGA 2.41 A
CAG 0 CTG 68.73 CGG 0 CCG 20.02 CTG 0 CAG 30.80 CCG 0 CGG 23.92 G
A Ile AAT 0 ATT 6.69 Thr AGT 0 ACT 2.44 Asn ATT 0 AAT 3.39 Ser ACT 0 AGT 3.57 T
GAT 0 ATC 25.94 GGT 0 ACC 33.73 GTT 0 AAC 18.92 GCT 0 AGC 20.82 C
TAT 0 ATA 1.22 TGT 0 ACA 2.21 Lys TTT 0 AAA 7.02 Arg TCT 0 AGA 1.36 A
Met CAT 1 ATG 17.19 CGT 0 ACG 15.67 CTT 0 AAG 22.02 CCT 0 AGG 6.39 G
G Val AAC 0 GTT 4.53 Ala AGC 0 GCT 7.66 Asp ATC 0 GAT 8.45 Gly ACC 0 GGT 7.59 T
GAC 0 GTC 23.12 GGC 0 GCC 67.03 GTC 0 GAC 37.79 GCC 1 GGC 47.67 C
TAC 0 GTA 3.20 TGC 0 GCA 6.46 Glu TTC 0 GAA 18.96 TCC 0 GGA 7.34 A
CAC 0 GTG 47.91 CGC 0 GCG 37.59 CTC 0 GAG 44.55 CCC 0 GGG 27.38 G



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