Composite table

Deltaproteobacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 15.58 Ser AGA 0 TCT 2.56 Tyr ATA 0 TAT 14.75 Cys ACA 0 TGT 2.47 T
GAA 0 TTC 22.32 GGA 0 TCC 10.95 GTA 0 TAC 10.92 GCA 0 TGC 9.55 C
Leu TAA 0 TTA 3.08 TGA 0 TCA 3.18 ochre TTA 0 TAA 1.14 opal Sec TCA 0 TGA 1.12 A
CAA 0 TTG 14.27 CGA 0 TCG 18.23 amber CTA 0 TAG 0.34 Trp CCA 0 TGG 12.46 G
C Leu AAG 0 CTT 11.28 Pro AGG 0 CCT 2.93 His ATG 0 CAT 8.18 Arg ACG 0 CGT 5.84 T
GAG 0 CTC 30.09 GGG 0 CCC 19.12 GTG 0 CAC 12.02 GCG 0 CGC 40.94 C
TAG 0 CTA 2.96 TGG 0 CCA 3.15 Gln TTG 0 CAA 10.87 TCG 0 CGA 6.18 A
CAG 0 CTG 35.43 CGG 0 CCG 24.71 CTG 0 CAG 25.07 CCG 0 CGG 9.35 G
A Ile AAT 0 ATT 11.57 Thr AGT 0 ACT 2.31 Asn ATT 0 AAT 12.35 Ser ACT 0 AGT 3.46 T
GAT 0 ATC 36.07 GGT 0 ACC 30.96 GTT 0 AAC 18.08 GCT 0 AGC 22.11 C
TAT 0 ATA 1.73 TGT 0 ACA 2.63 Lys TTT 0 AAA 14.57 Arg TCT 0 AGA 1.13 A
Met CAT 0 ATG 21.93 CGT 0 ACG 14.89 CTT 0 AAG 22.40 CCT 0 AGG 1.63 G
G Val AAC 0 GTT 7.28 Ala AGC 0 GCT 6.56 Asp ATC 0 GAT 19.74 Gly ACC 0 GGT 8.24 T
GAC 0 GTC 33.85 GGC 0 GCC 50.14 GTC 0 GAC 45.23 GCC 0 GGC 46.78 C
TAC 0 GTA 2.26 TGC 0 GCA 6.62 Glu TTC 0 GAA 19.72 TCC 0 GGA 6.50 A
CAC 0 GTG 25.75 CGC 0 GCG 45.40 CTC 0 GAG 49.69 CCC 0 GGG 17.37 G



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