Composite table

Dictyoglomota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 41.83 Ser AGA 0 TCT 20.40 Tyr ATA 0 TAT 35.43 Cys ACA 0 TGT 5.66 T
GAA 3 TTC 8.92 GGA 3 TCC 6.17 GTA 3 TAC 8.15 GCA 3 TGC 1.39 C
Leu TAA 3 TTA 38.08 TGA 3 TCA 9.65 ochre TTA 0 TAA 1.78 opal Sec TCA 0 TGA 0.73 A
CAA 3 TTG 13.89 CGA 3 TCG 1.95 amber CTA 0 TAG 0.62 Trp CCA 3 TGG 11.07 G
C Leu AAG 0 CTT 34.57 Pro AGG 0 CCT 21.87 His ATG 0 CAT 11.15 Arg ACG 3 CGT 1.52 T
GAG 3 CTC 5.79 GGG 3 CCC 5.64 GTG 3 CAC 2.53 GCG 0 CGC 0.37 C
TAG 3 CTA 8.78 TGG 3 CCA 11.35 Gln TTG 3 CAA 15.27 TCG 3 CGA 1.07 A
CAG 3 CTG 2.97 CGG 3 CCG 1.10 CTG 3 CAG 6.24 CCG 3 CGG 0.30 G
A Ile AAT 0 ATT 41.90 Thr AGT 0 ACT 18.55 Asn ATT 0 AAT 37.85 Ser ACT 0 AGT 13.37 T
GAT 4 ATC 9.66 GGT 3 ACC 8.25 GTT 3 AAC 9.86 GCT 3 AGC 4.52 C
TAT 0 ATA 46.26 TGT 3 ACA 13.06 Lys TTT 3 AAA 58.07 Arg TCT 3 AGA 30.01 A
Met CAT 9 ATG 19.17 CGT 3 ACG 1.92 CTT 3 AAG 27.87 CCT 3 AGG 10.89 G
G Val AAC 0 GTT 22.10 Ala AGC 0 GCT 22.38 Asp ATC 0 GAT 41.22 Gly ACC 0 GGT 18.64 T
GAC 3 GTC 3.89 GGC 3 GCC 6.93 GTC 3 GAC 7.81 GCC 3 GGC 4.75 C
TAC 3 GTA 28.43 TGC 4 GCA 19.59 Glu TTC 3 GAA 52.85 TCC 3 GGA 34.05 A
CAC 3 GTG 10.29 CGC 3 GCG 2.58 CTC 3 GAG 28.45 CCC 3 GGG 8.60 G



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