Composite table

Duplodnaviria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 6.85 Ser AGA 0 TCT 1.34 Tyr ATA 0 TAT 0.70 Cys ACA 0 TGT 0.56 T
GAA 0 TTC 26.64 GGA 0 TCC 15.10 GTA 0 TAC 23.16 GCA 0 TGC 15.58 C
Leu TAA 0 TTA 0.20 TGA 0 TCA 0.33 ochre TTA 0 TAA 0.50 opal Sec TCA 0 TGA 1.17 A
CAA 0 TTG 0.64 CGA 0 TCG 18.59 amber CTA 0 TAG 0.25 Trp CCA 0 TGG 9.64 G
C Leu AAG 0 CTT 0.59 Pro AGG 0 CCT 1.28 His ATG 0 CAT 0.78 Arg ACG 0 CGT 1.06 T
GAG 0 CTC 39.09 GGG 0 CCC 41.18 GTG 0 CAC 22.13 GCG 0 CGC 65.96 C
TAG 0 CTA 0.53 TGG 0 CCA 1.98 Gln TTG 0 CAA 0.75 TCG 0 CGA 1.45 A
CAG 0 CTG 57.46 CGG 0 CCG 36.89 CTG 0 CAG 23.32 CCG 0 CGG 22.13 G
A Ile AAT 0 ATT 0.53 Thr AGT 0 ACT 0.36 Asn ATT 0 AAT 0.31 Ser ACT 0 AGT 0.64 T
GAT 0 ATC 17.50 GGT 0 ACC 18.53 GTT 0 AAC 17.78 GCT 0 AGC 17.28 C
TAT 0 ATA 0.53 TGT 0 ACA 0.67 Lys TTT 0 AAA 0.59 Arg TCT 0 AGA 0.61 A
Met CAT 0 ATG 16.16 CGT 0 ACG 28.12 CTT 0 AAG 12.15 CCT 0 AGG 1.84 G
G Val AAC 0 GTT 0.42 Ala AGC 0 GCT 1.78 Asp ATC 0 GAT 2.42 Gly ACC 0 GGT 1.73 T
GAC 0 GTC 27.50 GGC 0 GCC 84.63 GTC 0 GAC 55.34 GCC 0 GGC 48.15 C
TAC 0 GTA 0.39 TGC 0 GCA 2.03 Glu TTC 0 GAA 3.12 TCC 0 GGA 2.84 A
CAC 0 GTG 47.20 CGC 0 GCG 70.78 CTC 0 GAG 55.40 CCC 0 GGG 24.86 G



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