Composite table

Fibrobacterota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 22.28 Ser AGA 0 TCT 12.84 Tyr ATA 0 TAT 15.78 Cys ACA 0 TGT 3.79 T
GAA 111 TTC 25.17 GGA 103 TCC 15.50 GTA 97 TAC 20.25 GCA 112 TGC 9.34 C
Leu TAA 109 TTA 5.86 TGA 111 TCA 4.98 ochre TTA 0 TAA 1.54 opal Sec TCA 0 TGA 0.53 A
CAA 104 TTG 18.99 CGA 101 TCG 11.46 amber CTA 0 TAG 0.67 Trp CCA 82 TGG 12.89 G
C Leu AAG 1 CTT 19.97 Pro AGG 0 CCT 7.73 His ATG 0 CAT 8.58 Arg ACG 99 CGT 11.18 T
GAG 182 CTC 21.04 GGG 109 CCC 10.86 GTG 105 CAC 9.36 GCG 0 CGC 19.55 C
TAG 119 CTA 3.51 TGG 107 CCA 3.55 Gln TTG 112 CAA 9.93 TCG 1 CGA 3.82 A
CAG 109 CTG 19.50 CGG 104 CCG 17.00 CTG 108 CAG 20.21 CCG 114 CGG 3.57 G
A Ile AAT 0 ATT 27.87 Thr AGT 1 ACT 9.81 Asn ATT 0 AAT 20.18 Ser ACT 0 AGT 7.44 T
GAT 59 ATC 26.45 GGT 108 ACC 18.47 GTT 136 AAC 25.73 GCT 104 AGC 16.10 C
TAT 0 ATA 6.31 TGT 99 ACA 8.81 Lys TTT 115 AAA 25.20 Arg TCT 105 AGA 4.53 A
Met CAT 211 ATG 25.08 CGT 108 ACG 15.21 CTT 213 AAG 40.69 CCT 109 AGG 3.83 G
G Val AAC 0 GTT 18.20 Ala AGC 0 GCT 18.98 Asp ATC 0 GAT 29.39 Gly ACC 0 GGT 19.36 T
GAC 112 GTC 17.57 GGC 109 GCC 28.04 GTC 200 GAC 29.40 GCC 188 GGC 30.27 C
TAC 106 GTA 9.17 TGC 61 GCA 18.58 Glu TTC 158 GAA 52.75 TCC 111 GGA 13.71 A
CAC 110 GTG 24.18 CGC 111 GCG 16.89 CTC 108 GAG 12.81 CCC 105 GGG 7.74 G



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