Composite table

Fidelibacterota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 35.57 Ser AGA 0 TCT 17.96 Tyr ATA 0 TAT 28.09 Cys ACA 0 TGT 5.28 T
GAA 12 TTC 12.53 GGA 9 TCC 7.29 GTA 14 TAC 9.42 GCA 9 TGC 2.91 C
Leu TAA 11 TTA 32.89 TGA 10 TCA 18.96 ochre TTA 0 TAA 1.69 opal Sec TCA 9 TGA 0.71 A
CAA 14 TTG 13.96 CGA 8 TCG 5.72 amber CTA 0 TAG 0.63 Trp CCA 14 TGG 12.28 G
C Leu AAG 0 CTT 17.58 Pro AGG 0 CCT 11.80 His ATG 1 CAT 13.48 Arg ACG 12 CGT 6.10 T
GAG 12 CTC 7.23 GGG 12 CCC 6.13 GTG 10 CAC 5.10 GCG 0 CGC 4.68 C
TAG 12 CTA 10.68 TGG 9 CCA 12.83 Gln TTG 13 CAA 19.87 TCG 4 CGA 5.28 A
CAG 14 CTG 11.70 CGG 11 CCG 6.40 CTG 10 CAG 10.84 CCG 12 CGG 4.33 G
A Ile AAT 0 ATT 44.02 Thr AGT 0 ACT 16.58 Asn ATT 0 AAT 42.67 Ser ACT 0 AGT 14.17 T
GAT 11 ATC 16.59 GGT 13 ACC 10.38 GTT 17 AAC 13.03 GCT 11 AGC 8.49 C
TAT 0 ATA 24.71 TGT 14 ACA 18.92 Lys TTT 14 AAA 49.36 Arg TCT 10 AGA 14.54 A
Met CAT 35 ATG 23.69 CGT 13 ACG 6.65 CTT 15 AAG 17.02 CCT 14 AGG 5.01 G
G Val AAC 0 GTT 24.34 Ala AGC 0 GCT 20.08 Asp ATC 0 GAT 46.12 Gly ACC 0 GGT 24.74 T
GAC 11 GTC 8.27 GGC 10 GCC 11.38 GTC 12 GAC 13.25 GCC 12 GGC 12.23 C
TAC 11 GTA 18.48 TGC 11 GCA 21.48 Glu TTC 11 GAA 44.37 TCC 14 GGA 24.17 A
CAC 8 GTG 10.28 CGC 11 GCG 8.41 CTC 12 GAG 17.83 CCC 7 GGG 8.84 G



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