Composite table

Fusobacteriota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 39.91 Ser AGA 0 TCT 17.29 Tyr ATA 0 TAT 36.25 Cys ACA 0 TGT 6.82 T
GAA 581 TTC 7.98 GGA 99 TCC 3.50 GTA 339 TAC 6.51 GCA 307 TGC 1.54 C
Leu TAA 479 TTA 44.83 TGA 568 TCA 15.95 ochre TTA 0 TAA 2.20 opal Sec TCA 65 TGA 0.37 A
CAA 333 TTG 13.91 CGA 6 TCG 1.95 amber CTA 0 TAG 0.72 Trp CCA 348 TGG 6.89 G
C Leu AAG 7 CTT 19.01 Pro AGG 0 CCT 11.72 His ATG 0 CAT 10.65 Arg ACG 330 CGT 2.42 T
GAG 71 CTC 1.93 GGG 4 CCC 1.42 GTG 281 CAC 2.60 GCG 0 CGC 0.46 C
TAG 445 CTA 7.96 TGG 552 CCA 10.73 Gln TTG 543 CAA 18.04 TCG 271 CGA 1.95 A
CAG 52 CTG 5.09 CGG 7 CCG 2.70 CTG 3 CAG 5.86 CCG 3 CGG 0.71 G
A Ile AAT 0 ATT 42.20 Thr AGT 0 ACT 20.13 Asn ATT 0 AAT 49.95 Ser ACT 20 AGT 15.75 T
GAT 224 ATC 9.03 GGT 111 ACC 3.18 GTT 508 AAC 9.40 GCT 360 AGC 4.52 C
TAT 1 ATA 43.08 TGT 568 ACA 22.50 Lys TTT 626 AAA 78.24 Arg TCT 401 AGA 26.24 A
Met CAT 1127 ATG 24.63 CGT 71 ACG 2.66 CTT 290 AAG 18.90 CCT 245 AGG 3.15 G
G Val AAC 0 GTT 25.92 Ala AGC 0 GCT 23.12 Asp ATC 0 GAT 44.25 Gly ACC 0 GGT 15.52 T
GAC 3 GTC 3.66 GGC 3 GCC 4.66 GTC 834 GAC 8.24 GCC 103 GGC 2.89 C
TAC 841 GTA 24.75 TGC 448 GCA 24.80 Glu TTC 889 GAA 65.66 TCC 1009 GGA 40.30 A
CAC 3 GTG 7.41 CGC 3 GCG 3.40 CTC 6 GAG 15.47 CCC 3 GGG 6.53 G



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