Composite table

Ignavibacteriota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 34.70 Ser AGA 0 TCT 13.37 Tyr ATA 0 TAT 26.89 Cys ACA 0 TGT 4.08 T
GAA 33 TTC 17.78 GGA 34 TCC 8.37 GTA 40 TAC 13.08 GCA 40 TGC 3.89 C
Leu TAA 36 TTA 25.00 TGA 34 TCA 17.27 ochre TTA 0 TAA 1.65 opal Sec TCA 4 TGA 0.83 A
CAA 37 TTG 15.31 CGA 37 TCG 9.23 amber CTA 0 TAG 0.52 Trp CCA 41 TGG 11.13 G
C Leu AAG 0 CTT 24.51 Pro AGG 0 CCT 10.07 His ATG 0 CAT 10.79 Arg ACG 35 CGT 5.65 T
GAG 41 CTC 10.75 GGG 35 CCC 6.11 GTG 34 CAC 5.64 GCG 0 CGC 5.92 C
TAG 40 CTA 6.51 TGG 39 CCA 9.47 Gln TTG 39 CAA 16.80 TCG 26 CGA 4.04 A
CAG 39 CTG 11.65 CGG 38 CCG 11.00 CTG 39 CAG 12.87 CCG 42 CGG 4.35 G
A Ile AAT 0 ATT 43.96 Thr AGT 0 ACT 15.92 Asn ATT 0 AAT 38.89 Ser ACT 0 AGT 10.49 T
GAT 8 ATC 16.87 GGT 40 ACC 9.47 GTT 35 AAC 17.95 GCT 40 AGC 10.36 C
TAT 0 ATA 22.21 TGT 37 ACA 20.15 Lys TTT 43 AAA 54.18 Arg TCT 36 AGA 15.73 A
Met CAT 95 ATG 20.64 CGT 42 ACG 8.03 CTT 33 AAG 19.86 CCT 41 AGG 5.03 G
G Val AAC 0 GTT 29.24 Ala AGC 0 GCT 18.23 Asp ATC 0 GAT 39.45 Gly ACC 0 GGT 19.82 T
GAC 35 GTC 8.96 GGC 39 GCC 11.05 GTC 33 GAC 13.81 GCC 39 GGC 14.73 C
TAC 25 GTA 15.90 TGC 7 GCA 23.57 Glu TTC 37 GAA 49.17 TCC 37 GGA 24.37 A
CAC 12 GTG 9.74 CGC 31 GCG 10.18 CTC 38 GAG 15.58 CCC 29 GGG 7.24 G



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