Composite table

Kiritimatiellota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 20.59 Ser AGA 0 TCT 5.73 Tyr ATA 0 TAT 18.38 Cys ACA 0 TGT 3.88 T
GAA 7 TTC 20.88 GGA 5 TCC 15.94 GTA 5 TAC 13.16 GCA 6 TGC 7.71 C
Leu TAA 6 TTA 5.34 TGA 5 TCA 5.67 ochre TTA 0 TAA 1.14 opal Sec TCA 0 TGA 0.85 A
CAA 6 TTG 15.12 CGA 5 TCG 13.36 amber CTA 0 TAG 0.63 Trp CCA 5 TGG 15.83 G
C Leu AAG 0 CTT 12.31 Pro AGG 0 CCT 6.06 His ATG 0 CAT 11.35 Arg ACG 5 CGT 9.32 T
GAG 6 CTC 20.93 GGG 3 CCC 13.66 GTG 4 CAC 10.14 GCG 0 CGC 21.22 C
TAG 6 CTA 2.73 TGG 7 CCA 3.97 Gln TTG 5 CAA 10.31 TCG 3 CGA 4.47 A
CAG 5 CTG 37.38 CGG 4 CCG 23.19 CTG 5 CAG 23.63 CCG 5 CGG 13.42 G
A Ile AAT 0 ATT 23.90 Thr AGT 0 ACT 5.01 Asn ATT 0 AAT 17.82 Ser ACT 0 AGT 7.28 T
GAT 7 ATC 28.14 GGT 8 ACC 27.15 GTT 7 AAC 21.53 GCT 6 AGC 13.33 C
TAT 0 ATA 3.68 TGT 6 ACA 6.58 Lys TTT 5 AAA 28.41 Arg TCT 6 AGA 2.54 A
Met CAT 19 ATG 25.46 CGT 4 ACG 16.62 CTT 6 AAG 20.04 CCT 6 AGG 2.41 G
G Val AAC 0 GTT 16.62 Ala AGC 0 GCT 10.78 Asp ATC 0 GAT 33.60 Gly ACC 0 GGT 14.19 T
GAC 6 GTC 17.98 GGC 5 GCC 36.92 GTC 6 GAC 25.65 GCC 8 GGC 32.78 C
TAC 5 GTA 7.09 TGC 7 GCA 13.70 Glu TTC 7 GAA 41.80 TCC 4 GGA 18.02 A
CAC 4 GTG 26.45 CGC 3 GCG 26.24 CTC 2 GAG 24.31 CCC 5 GGG 15.64 G



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