Composite table

Microsporidia


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 25.79 Ser AGA 0 TCT 16.12 Tyr ATA 0 TAT 16.75 Cys ACA 0 TGT 7.20 T
GAA 1 TTC 21.90 GGA 0 TCC 13.31 GTA 1 TAC 19.38 GCA 1 TGC 13.21 C
Leu TAA 1 TTA 3.90 TGA 1 TCA 8.03 ochre TTA 0 TAA 0.99 opal Sec TCA 0 TGA 1.04 A
CAA 1 TTG 10.74 CGA 1 TCG 12.44 amber CTA 0 TAG 0.75 Trp CCA 1 TGG 7.87 G
C Leu AAG 1 CTT 24.64 Pro AGG 1 CCT 9.35 His ATG 0 CAT 9.16 Arg ACG 1 CGT 2.12 T
GAG 0 CTC 16.56 GGG 0 CCC 7.88 GTG 1 CAC 10.08 GCG 0 CGC 2.84 C
TAG 1 CTA 9.66 TGG 1 CCA 9.13 Gln TTG 1 CAA 6.04 TCG 1 CGA 3.13 A
CAG 1 CTG 29.44 CGG 1 CCG 7.44 CTG 1 CAG 16.69 CCG 0 CGG 5.68 G
A Ile AAT 1 ATT 20.85 Thr AGT 1 ACT 7.13 Asn ATT 0 AAT 15.56 Ser ACT 0 AGT 9.76 T
GAT 0 ATC 21.33 GGT 0 ACC 9.82 GTT 2 AAC 23.29 GCT 1 AGC 20.04 C
TAT 1 ATA 24.42 TGT 1 ACA 14.32 Lys TTT 1 AAA 17.34 Arg TCT 1 AGA 24.33 A
Met CAT 1 ATG 29.99 CGT 1 ACG 9.52 CTT 1 AAG 53.31 CCT 1 AGG 28.82 G
G Val AAC 1 GTT 20.77 Ala AGC 1 GCT 9.37 Asp ATC 0 GAT 24.16 Gly ACC 0 GGT 5.99 T
GAC 0 GTC 15.33 GGC 0 GCC 12.77 GTC 1 GAC 30.30 GCC 1 GGC 11.29 C
TAC 1 GTA 10.00 TGC 1 GCA 20.46 Glu TTC 1 GAA 26.99 TCC 1 GGA 26.56 A
CAC 1 GTG 24.19 CGC 1 GCG 7.72 CTC 1 GAG 53.81 CCC 1 GGG 21.20 G



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