Composite table

Mycoplasmatota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 43.80 Ser AGA 2 TCT 14.74 Tyr ATA 0 TAT 31.72 Cys ACA 0 TGT 4.85 T
GAA 339 TTC 9.16 GGA 174 TCC 3.10 GTA 359 TAC 9.23 GCA 350 TGC 1.48 C
Leu TAA 366 TTA 55.93 TGA 370 TCA 21.78 ochre TTA 0 TAA 2.42 opal Sec TCA 314 TGA 7.25 A
CAA 368 TTG 10.60 CGA 194 TCG 2.97 amber CTA 0 TAG 0.69 Trp CCA 366 TGG 2.77 G
C Leu AAG 62 CTT 14.48 Pro AGG 0 CCT 10.31 His ATG 0 CAT 10.59 Arg ACG 230 CGT 6.49 T
GAG 163 CTC 3.22 GGG 17 CCC 2.44 GTG 375 CAC 5.06 GCG 133 CGC 2.58 C
TAG 362 CTA 10.81 TGG 365 CCA 13.36 Gln TTG 355 CAA 32.15 TCG 148 CGA 2.16 A
CAG 20 CTG 2.67 CGG 23 CCG 2.27 CTG 26 CAG 4.77 CCG 29 CGG 1.12 G
A Ile AAT 0 ATT 58.48 Thr AGT 31 ACT 21.95 Asn ATT 0 AAT 53.45 Ser ACT 0 AGT 17.40 T
GAT 341 ATC 12.69 GGT 286 ACC 6.86 GTT 368 AAC 19.06 GCT 378 AGC 5.72 C
TAT 7 ATA 19.56 TGT 368 ACA 21.44 Lys TTT 404 AAA 79.19 Arg TCT 364 AGA 16.46 A
Met CAT 1091 ATG 18.79 CGT 184 ACG 3.24 CTT 289 AAG 17.58 CCT 164 AGG 1.74 G
G Val AAC 0 GTT 31.39 Ala AGC 0 GCT 23.19 Asp ATC 0 GAT 44.26 Gly ACC 0 GGT 21.97 T
GAC 33 GTC 5.01 GGC 7 GCC 5.54 GTC 325 GAC 10.22 GCC 226 GGC 5.72 C
TAC 384 GTA 14.98 TGC 366 GCA 20.65 Glu TTC 403 GAA 55.28 TCC 361 GGA 17.03 A
CAC 1 GTG 6.42 CGC 2 GCG 4.16 CTC 10 GAG 9.02 CCC 5 GGG 4.59 G



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