Composite table

Myxococcota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 1.88 Ser AGA 1 TCT 1.43 Tyr ATA 0 TAT 2.97 Cys ACA 0 TGT 1.56 T
GAA 181 TTC 30.93 GGA 153 TCC 16.42 GTA 228 TAC 17.52 GCA 164 TGC 8.71 C
Leu TAA 147 TTA 0.19 TGA 157 TCA 1.50 ochre TTA 0 TAA 0.16 opal Sec TCA 128 TGA 1.89 A
CAA 221 TTG 6.43 CGA 150 TCG 17.76 amber CTA 2 TAG 0.64 Trp CCA 157 TGG 13.68 G
C Leu AAG 12 CTT 2.83 Pro AGG 0 CCT 3.79 His ATG 0 CAT 3.38 Arg ACG 166 CGT 5.23 T
GAG 190 CTC 42.51 GGG 195 CCC 25.13 GTG 182 CAC 17.78 GCG 47 CGC 44.39 C
TAG 158 CTA 0.57 TGG 163 CCA 2.51 Gln TTG 157 CAA 2.79 TCG 153 CGA 3.83 A
CAG 276 CTG 55.06 CGG 265 CCG 29.96 CTG 179 CAG 29.52 CCG 170 CGG 22.54 G
A Ile AAT 0 ATT 2.87 Thr AGT 0 ACT 1.21 Asn ATT 0 AAT 2.38 Ser ACT 0 AGT 1.45 T
GAT 216 ATC 28.04 GGT 151 ACC 23.18 GTT 209 AAC 18.38 GCT 158 AGC 17.23 C
TAT 0 ATA 0.33 TGT 153 ACA 1.52 Lys TTT 153 AAA 1.73 Arg TCT 157 AGA 0.69 A
Met CAT 614 ATG 18.23 CGT 180 ACG 27.78 CTT 221 AAG 26.55 CCT 163 AGG 3.24 G
G Val AAC 0 GTT 2.09 Ala AGC 0 GCT 4.54 Asp ATC 0 GAT 9.54 Gly ACC 0 GGT 6.53 T
GAC 165 GTC 29.31 GGC 201 GCC 50.55 GTC 234 GAC 44.24 GCC 280 GGC 55.42 C
TAC 156 GTA 1.04 TGC 200 GCA 4.49 Glu TTC 185 GAA 8.22 TCC 156 GGA 7.01 A
CAC 159 GTG 48.06 CGC 188 GCG 64.38 CTC 200 GAG 55.13 CCC 175 GGG 19.14 G



BACK