Composite table

Nitrospinota

Bacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 26.70 Ser AGA 0 TCT 10.48 Tyr ATA 0 TAT 18.81 Cys ACA 0 TGT 4.61 T
GAA 25 TTC 18.17 GGA 25 TCC 12.06 GTA 12 TAC 12.70 GCA 27 TGC 5.80 C
Leu TAA 31 TTA 13.95 TGA 26 TCA 10.45 ochre TTA 0 TAA 1.44 opal Sec TCA 2 TGA 1.32 A
CAA 30 TTG 16.04 CGA 22 TCG 8.07 amber CTA 0 TAG 0.57 Trp CCA 24 TGG 10.92 G
C Leu AAG 0 CTT 18.69 Pro AGG 0 CCT 10.77 His ATG 0 CAT 11.32 Arg ACG 2 CGT 5.86 T
GAG 27 CTC 17.07 GGG 27 CCC 11.54 GTG 22 CAC 9.01 GCG 24 CGC 12.63 C
TAG 25 CTA 5.80 TGG 29 CCA 7.63 Gln TTG 28 CAA 11.69 TCG 26 CGA 4.24 A
CAG 29 CTG 26.21 CGG 27 CCG 12.58 CTG 25 CAG 19.50 CCG 25 CGG 8.82 G
A Ile AAT 0 ATT 27.45 Thr AGT 0 ACT 9.24 Asn ATT 0 AAT 23.76 Ser ACT 0 AGT 8.42 T
GAT 14 ATC 25.69 GGT 12 ACC 18.14 GTT 32 AAC 17.56 GCT 28 AGC 10.57 C
TAT 0 ATA 22.53 TGT 12 ACA 12.98 Lys TTT 30 AAA 40.86 Arg TCT 25 AGA 10.38 A
Met CAT 77 ATG 24.34 CGT 24 ACG 9.44 CTT 23 AAG 28.84 CCT 25 AGG 10.75 G
G Val AAC 0 GTT 17.42 Ala AGC 0 GCT 12.76 Asp ATC 0 GAT 31.27 Gly ACC 0 GGT 16.88 T
GAC 28 GTC 15.16 GGC 24 GCC 23.45 GTC 18 GAC 22.19 GCC 25 GGC 21.80 C
TAC 21 GTA 13.22 TGC 14 GCA 18.58 Glu TTC 23 GAA 40.74 TCC 12 GGA 18.21 A
CAC 24 GTG 20.14 CGC 24 GCG 16.06 CTC 21 GAG 29.95 CCC 15 GGG 15.75 G



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