Composite table

Tenericutes


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 47.61 Ser AGA 0 TCT 15.75 Tyr ATA 0 TAT 34.93 Cys ACA 0 TGT 4.19 T
GAA 6 TTC 8.17 GGA 1 TCC 2.09 GTA 5 TAC 7.71 GCA 7 TGC 1.37 C
Leu TAA 7 TTA 57.45 TGA 6 TCA 24.97 ochre TTA 0 TAA 2.52 opal Sec TCA 7 TGA 8.81 A
CAA 7 TTG 10.03 CGA 2 TCG 2.23 amber CTA 0 TAG 0.60 Trp CCA 6 TGG 1.31 G
C Leu AAG 3 CTT 16.72 Pro AGG 0 CCT 10.95 His ATG 0 CAT 10.15 Arg ACG 6 CGT 5.22 T
GAG 1 CTC 1.50 GGG 0 CCC 1.07 GTG 5 CAC 3.65 GCG 0 CGC 1.14 C
TAG 6 CTA 8.95 TGG 6 CCA 12.57 Gln TTG 5 CAA 32.18 TCG 2 CGA 1.57 A
CAG 0 CTG 1.00 CGG 0 CCG 1.43 CTG 0 CAG 2.38 CCG 0 CGG 0.48 G
A Ile AAT 0 ATT 62.62 Thr AGT 0 ACT 21.07 Asn ATT 0 AAT 63.88 Ser ACT 0 AGT 15.39 T
GAT 5 ATC 9.41 GGT 4 ACC 4.14 GTT 6 AAC 16.40 GCT 7 AGC 5.27 C
TAT 0 ATA 22.46 TGT 6 ACA 23.42 Lys TTT 7 AAA 96.28 Arg TCT 5 AGA 18.47 A
Met CAT 18 ATG 16.61 CGT 2 ACG 1.35 CTT 3 AAG 13.41 CCT 2 AGG 1.57 G
G Val AAC 0 GTT 31.47 Ala AGC 0 GCT 22.77 Asp ATC 0 GAT 45.06 Gly ACC 0 GGT 19.14 T
GAC 0 GTC 3.08 GGC 0 GCC 3.20 GTC 6 GAC 9.01 GCC 2 GGC 4.77 C
TAC 6 GTA 13.45 TGC 6 GCA 21.70 Glu TTC 6 GAA 61.21 TCC 7 GGA 16.74 A
CAC 0 GTG 3.69 CGC 0 GCG 2.65 CTC 0 GAG 6.75 CCC 0 GGG 2.86 G



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